PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47746.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 237aa    MW: 26932.5 Da    PI: 6.3514
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.7e-053055123
                EEET..TTTEEESSHHHHHHHHHH.T CS
     zf-C2H2  1 ykCp..dCgksFsrksnLkrHirt.H 23
                + Cp   Cgk++ + + Lk+Hi++ H
  PHT47746.1 30 HICPypACGKRYAHEYKLKNHISStH 55
                6799999***************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MYVHMKGGKA FSLDFNLRSH MKTHSQENYH ICPYPACGKR YAHEYKLKNH ISSTHQKNTP  60
VAPKYTPPVE KPVKTPKSTP ATYGSSSSER PYSCPYEGCD KSYIHEYKPN VLLRNMHPGH  120
LPDDNAKNAQ SAADNVMDEG SDQDTYAARR GNGRIQKQSR PKPSLKQPPL KVARKGSSSA  180
ASQANLSILK KPWPLKEENY NEEDSEETEE ERERDDVGEG WRYGENDDDD EETEEDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06634.27e-62C2H2 family protein