PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47775.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 184aa    MW: 20993.3 Da    PI: 8.216
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.61.6e-061767654
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksL 54
                +  E++RR +++   ++L +ll ++ + +s+K  l+  + + +A+ YI +L
  PHT47775.1 17 KTLEKNRRIKMKLLCSKLFSLLSPPHHHQSTKevLTQEDQVDQAITYIEEL 67
                578*******************998877788779**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MGSSYVIRTS AEKLDRKTLE KNRRIKMKLL CSKLFSLLSP PHHHQSTKEV LTQEDQVDQA  60
ITYIEELKER VEVLKRRKEE LEQGTGDQSK KFMPTTAYIS IKTPMVEVRE LGSILEVILT  120
CGLQKNFTVQ EVIKIIEEEG AQVVTADYST IGDTIYYTIH AQVKITRLGI DASSVHLRLQ  180
MLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-16bHLH family protein