PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT47809.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 279aa    MW: 30204.5 Da    PI: 5.2312
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT47809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.4e-11158205455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  PHT47809.1 158 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 205
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDPPIINESS FSAANPSSYS LAEIWPFSSA AANGDIGGGG LGLRMSSFTG LLEAAANSIN  60
ESTVTEQSGR SGGDVRKRDV NSEDDFSKFV STSDANELDG SVAKRLKASQ SKEENGASKV  120
ELESSSQTAN KGTEQSSKPE PPKDYIHVRA RRGQATDSHS LAERARREKI SERMKILQDL  180
VPGCNKVIGK ALVLDEIINY IQSLQRQVEF LSMKLEAVNS RMNHPIETFP SKDLAPSTFD  240
ATGMIFGTQA PREYAQGAQS EWLHMQVGSS FDRATGQIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.12e-76bHLH family protein