PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48022.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 210aa    MW: 23693.6 Da    PI: 9.8463
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48022.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.12.8e-08471144791
        FAR1  47 k.......................tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 +                        +k+  +++++r++Cka+++ + ++dg   vtk+ leHnHel p
  PHT48022.1  47 QallkksakklagqlkyvifgcdkCRKTTVRNQSNRVDCKARVNCQVMNDGLCIVTKVILEHNHELEP 114
                 4444444445555555666665544455668899*******************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MNRSHPSVKD EDLSVSDGEE DHYGRMMLKK RKAQCMMIAT PKSNIRQALL KKSAKKLAGQ  60
LKYVIFGCDK CRKTTVRNQS NRVDCKARVN CQVMNDGLCI VTKVILEHNH ELEPALSHFL  120
PSHRTWLTAM GKIPPTAILT DQCESIKAVI HDVLPNTVHR DLMAYHQRRQ ISSSHANFLL  180
KADTILVPYH DFDATSPASS KLLLKLQLPG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12956KKRKAQCMMIATPKSNIRQALLKKSAKK