PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48105.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 328aa    MW: 36549.7 Da    PI: 7.0725
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.94.8e-154493255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r++h+  E+rRR +iN++f+ Lr l+P+     ++K + a+ L ++++Y++ Lq
  PHT48105.1 44 RTKHSVTEQRRRCKINERFQALRNLIPHT----NQKRDTASFLLEVIQYVQFLQ 93
                99**************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MKRMKGHQEE EEAEEDDACI KKDATPSSSN TKAGKNNDKA SALRTKHSVT EQRRRCKINE  60
RFQALRNLIP HTNQKRDTAS FLLEVIQYVQ FLQDKVQKYE GSYQPWSSEP TKLMPWRNSH  120
WHMQSLPVQP HALKNGTGPE STYLGRFDEN PATVTSTMQP NQQNPVESHT SRGVSFKSMD  180
QQNELANKSI TTTIPLQSGM PMPMPNNSAF SEPQPRPVSD QSSNIVDALN HRGDLAIDGG  240
TISISTPYSE GLLDSVIQAL LCAGIDLSEA TISTQINFGN RANQGMTPGP PIAKDNENPT  300
PSGKQHMDHF REASSDEDLK QAQKRLKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.17e-88bHLH family protein