PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48167.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 166aa    MW: 18765.2 Da    PI: 7.2192
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.11.2e-07721144991
        FAR1  49 ekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 +k + ++++++ +Ck ++  + ++dg  +vtk+ leHnH+l p
  PHT48167.1  72 RKIKARNQTKEADCKVRVSCHVTNDGSSVVTKVILEHNHKLEP 114
                 46677899999*****************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MNSSHQSIQD EDLSVFDGEE YDHREDGIEE EEGAMHDDSY TDEQYTARPV AGKCKKLVGQ  60
IKYVTFRYDK CRKIKARNQT KEADCKVRVS CHVTNDGSSV VTKVILEHNH KLEPALSRFL  120
PCHRELSRTL KRSLVAHDIA GLRPSKSIRL LAVEAGGLIT LNLQLS