PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48184.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 80aa    MW: 9478.85 Da    PI: 11.357
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.00053215619
                HHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsa 19
                +e+Er+RR+++Ns+
  PHT48184.1  2 PEAERQRRQKLNSS 15
                689*********95 PP
2HLH41.72e-132068255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                r +h e+Er+RR+++N+ f+ Lr ++P+ +      K +K++ L  A+ +I ++q
  PHT48184.1 20 RLNHAEVERQRRAKLNQQFNALRAVVPNiS------KKDKVSLLGDAIAHITDMQ 68
                889*************************66......99*************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    
MPEAERQRRQ KLNSSGREER LNHAEVERQR RAKLNQQFNA LRAVVPNISK KDKVSLLGDA  60
IAHITDMQKK IRTWKMREQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16430.16e-27bHLH family protein