PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48243.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 266aa    MW: 29752.8 Da    PI: 10.0055
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48243.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.71.8e-07119146431
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC. CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkas 31 
                 +h + ErrRRdri ++   L el+P++ 
  PHT48243.1 119 MHRMSERRRRDRIANKVKVLAELIPNCN 146
                 79************************74 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MSKWNLSFDS SSLEEGGVTE KLNLSHLKVD EVPEKNFWDH PSSLTQLTLG VPGVENHDAK  60
FGTNYSSSPY LENPHESRGK KRKCGENLVS VVDANGSGIP LRANEDGLKQ YPKASSVEMH  120
RMSERRRRDR IANKVKVLAE LIPNCNKVEP QYLIRPYNTF KPYNTKSSLN VMSMDGIPAW  180
HSATTLVARR KQIMQSTVHF NPYMPIMHRI AVGYFGGFGK SINHNNMFSS NFSPIISTGN  240
HFPFLPHAVI NISQGSPSVA APEKRA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124129ERRRRD