PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48276.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family CAMTA
Protein Properties Length: 190aa    MW: 21638.7 Da    PI: 9.615
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48276.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-153.45.1e-1744922877
        CG-1 28 lelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg 77
                 ++ +  + g ++L+nrk++ yfrkDG++w+k kdgkt++E+ ekL +g 
  PHT48276.1 44 RATMNVVSGGFVFLFNRKVLIYFRKDGHNWRK-KDGKTIKEAQEKLEIGK 92
                45556677899*******************86.7************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MLRCLYDDVI EVEAIQSMLN RRIMVVENTD FYGNLKSCNS KYRRATMNVV SGGFVFLFNR  60
KVLIYFRKDG HNWRKKDGKT IKEAQEKLEI GKRSSEFPGN SKEIKRKARD LATHAVTRVV  120
ELTSENFYGT MSSAIMKLPD TNSVDEGLNR DLDSQLMKTM SSSFLINART MANDGDQTKG  180
LSTTLDVEIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09410.21e-15CAMTA family protein