PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT48322.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 167aa MW: 18815.6 Da PI: 9.3033

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT48322.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.8	6.7e-10	2	40	10	48
HHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 10 ellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++lv+++k++G g+W++ ++ g+ R++k+c +rw +yl PHT48322.1 2 KKLVEYIKKHGHGSWHSLPHLAGLARCGKNCCLRWTNYL 40 79***********************************97 PP
2	Myb_DNA-binding	35.9	1.8e-11	46	91	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ e ++l ++++ +lG++ W++Ia+ + gRt++++k+ w+++l PHT48322.1 46 RGPFSHEVEKLVIQLHGMLGNR-WAAIASQLL-GRTDNEIKHLWNTHL 91 899*****************.****9.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MKKLVEYIKK HGHGSWHSLP HLAGLARCGK NCCLRWTNYL RPDIKRGPFS HEVEKLVIQL 60 HGMLGNRWAA IASQLLGRTD NEIKHLWNTH LKKCLLSMGI DPQTHEPSSA PNGLLVTSPT 120 SLAARHMAQW ESARLEAEAH LSRESQLLVP SSVESSGTDY FLHIWNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	3e-79	MYB family protein