PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48349.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 263aa    MW: 29749.1 Da    PI: 6.0444
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48349.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.9e-1890140256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr ++ +g+Wv+eIr+p++   + r++lg++ ta +Aa+a++ a+++++g+
  PHT48349.1  90 TYRGVRKRS-WGKWVSEIREPKK---KSRIWLGTYPTARMAARAHDVAALAIKGH 140
                 69****888.**********854...6***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MENQEDIISL EILAHHDHHD VFSNSSCNGL NSPSSTVTSS LASSSSFSPS NAPILEKYQS  60
LRKIQEVVKN NKNEEMKKTK RNGDDDKHPT YRGVRKRSWG KWVSEIREPK KKSRIWLGTY  120
PTARMAARAH DVAALAIKGH TIYLNFPHLA DQYPRPSSSS PKDIQAAAAK AAAITFSGEN  180
AEEEEEIRAE PNQIELQSCH SSTNLLLKSN QESLNDDTFF DLPDLSIDVV DQKNYYWCPM  240
PTWQQLIGAD ATVYRLDEPF LWE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.18e-38ERF family protein