PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48383.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 187aa    MW: 21668.4 Da    PI: 10.0733
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-1961112155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr+++ +g+++AeIrdp   + k +r +lg++ ++eeAa a+++a+ kl+g
  PHT48383.1  61 KKYRGVRRRP-WGKFAAEIRDP---KrKGARLWLGTYESPEEAALAYDRAAFKLRG 112
                 59********.**********8...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MHQENSREFD LSILDLELEH QFNSTNSDSI SDNLSVKKWE KIDENGDSIP CASSQVQNNW  60
KKYRGVRRRP WGKFAAEIRD PKRKGARLWL GTYESPEEAA LAYDRAAFKL RGTRALLNFP  120
HLIDTNIAEL NRVRPKRRSR SPEIKEEEEI PGPKRRNAQL INSLAKVNLN NHSIIQMFGV  180
TNYAFHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-37ERF family protein