PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48387.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 174aa    MW: 19674 Da    PI: 8.0491
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48387.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.1e-173484255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y GVr ++ +g+++AeIrd + ng   r++lg+f +aeeAa a+++ +++++g
  PHT48387.1 34 HYIGVRARP-WGKFAAEIRDSTRNG--IRVWLGTFNSAEEAAMAYDQVALSMRG 84
                799******.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MESSISLEDT LSSNDISSKE NDFCLERPQK EAKHYIGVRA RPWGKFAAEI RDSTRNGIRV  60
WLGTFNSAEE AAMAYDQVAL SMRGPSTCLN FPVERVSKML QETQNCNFFK NGLSPAAALK  120
EKHKKRSSSN ISRKKGKRKQ KVNNEEENNN IVFIFEDLGS DLLDELLSEY SSSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122135KHKKRSSSNISRKK
2133140RKKGKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-37ERF family protein