PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48388.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 236aa    MW: 27163.2 Da    PI: 5.6555
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.3e-19109159255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y GVr ++ +g+++AeIrd + ng   r++lg+f+taeeAa a+++a+++++g
  PHT48388.1 109 HYIGVRKRP-WGKYAAEIRDSTRNG--IRVWLGTFDTAEEAALAYDQAALSMRG 159
                 799******.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MSSNSSSPLE IDTSFSQSNF FFFQEQSPTT PWSSNNDIFF NDPFVNDDQY SPIIIPCDYE  60
KDHHRDQDLV VESTNTTITS KVSSQNSHHD QEEVTSQEKK QEDEQEEKHY IGVRKRPWGK  120
YAAEIRDSTR NGIRVWLGTF DTAEEAALAY DQAALSMRGP WSLLNFPIEK VKKSLEKIEY  180
SCKDGLSPAA VLKATHKTRR VKHKRKSRKK KNNLENVLVF EDLGVELLEE LLMTPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-28ERF family protein