PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48509.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 229aa    MW: 25593.5 Da    PI: 10.2058
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.4e-18141191255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrdps   k  r++lg+f+t  +Aa+a++ a+ k++g
  PHT48509.1 141 NYRGVRRRP-WGKYAAEIRDPSR--KGSRIWLGTFDTDVDAARAYDCAAFKMRG 191
                 59*******.**********854..34**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MSPVFITSIV KTEPSTSTSL SDSPNSSYLN EPNSPISRYF NLHSDFPEFK IDSDIILSPT  60
YSSAVSSSTK ENKNNQLKTA FKTDSDNILS PTYNSSAVSS STNKNKNNEH KNDNILNPTR  120
DNNCAISSSI KENKSTETKK NYRGVRRRPW GKYAAEIRDP SRKGSRIWLG TFDTDVDAAR  180
AYDCAAFKMR GRKAILNFPL DAGKSGAPAN IGRKRRRDSK MELMEVLNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1213217RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.11e-45ERF family protein