PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48603.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 381aa    MW: 42356.2 Da    PI: 4.8666
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48603.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.9e-1981131155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr++  +g+WvAeIr+p     +   r +lg+f ta eAa a+++a+++++g
  PHT48603.1  81 CKYRGVRQRT-WGKWVAEIREP-----HrgSRLWLGTFATAIEAALAYDEAARAMYG 131
                 79*****999.**********6.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MAILDQAPNM MLPLDYTRKR KSRSRKDAPK NVAETLARWK EVNEKQDSCD DDGRKPVRKV  60
PAKGSKKGCM KGKGGPENAR CKYRGVRQRT WGKWVAEIRE PHRGSRLWLG TFATAIEAAL  120
AYDEAARAMY GPCARLNLPD YNSSKESSKD ESSLPTVSHS GSNTASSFSE VCPADGMKGR  180
ASVPQIIHED GENEIKVDGT RTGSDECGTP LSTLREVVKD ETKGMLNTKV KEEPIAFEYD  240
PVLSGQGSLD SFSWNDDMFD VDELLSMIDS APLDASAPNQ DVGVPPQHKH YAYDPAYQFQ  300
TNQLSDPSCQ LKNADYQFSN PSYQMENAVG NTLEGLQQVK QQQVKQQAPL TDDFDFDFLK  360
PGREEDFNFC LDDLGLLDFG V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11722TRKRKS
22027RKSRSRKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.14e-38ERF family protein