PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT48740.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 133aa    MW: 15031.5 Da    PI: 12.0786
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT48740.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.97.7e-206599135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C++Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
  PHT48740.1 65 CQHCGVDKTPQWRGGPTGPKTLCNACGVRYKSGRL 99
                *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MSRAPGILQV PVNHPVGARS KRRRRTAFAE WGNQVKLKNT TKRRLTLLSK PMTKAKKATS  60
IGRRCQHCGV DKTPQWRGGP TGPKTLCNAC GVRYKSGRLL PEYRPANSPT FSADLHSNSH  120
RKVLEMRKQR IME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.15e-44GATA family protein