PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49100.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 201aa    MW: 21661.7 Da    PI: 10.633
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49100.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA581.3e-183670135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++
  PHT49100.1 36 CVDCGTSKTPLWRGGPAGPKSLCNACGIKSRKKRR 70
                ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MVDPSDKGLV SDEMSSETTS PVKSSPETSQ SNVKTCVDCG TSKTPLWRGG PAGPKSLCNA  60
CGIKSRKKRR ALLGLDKEDK KSKKSVSSGH KSVGLQHQSN QTSDGSSSSE DSGSNNFVKN  120
IVSSSLKKKL LPFGREVVLQ KPRSRSTQKR KLGEVEQAAF LLMALSCGSF YNQRRTKMEK  180
ARRNDKCCGT LGSKTSTLLV G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.16e-34GATA family protein