PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49162.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 172aa    MW: 19714 Da    PI: 10.0432
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49162.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.40.0014668123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ C++ Fs+   L  H  +H
  PHT49162.1 46 FECKTCNRQFSSFQALGGHRASH 68
                89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MVVLPMKRER EGELKPLKTM ANYLMLFSHR QNHFDTSMTN SPGKVFECKT CNRQFSSFQA  60
LGGHRASHKK PRLMGELNFQ MPISPPKPKI HECSICGLEF PIGQALGGHM RRHRGMLNEN  120
NSNNNIHQVP HHVVKKLKSS RVLCLDLNLT PLENDLELFK LKNEAPKVDC YL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.15e-37C2H2 family protein