PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT49172.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 357aa MW: 39950.9 Da PI: 9.7332

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT49172.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.5	1.5e-38	77	137	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC stntkfCyynny+lsqPr+fCk+CrryWt+GGalrnvPvGgg+r+n+k+s PHT49172.1 77 PENALKCPRCASTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKRS 137 7899*****************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MAFSSIPLYL DPSNWQHEQE NQQQQQLGVT NHEMNYPSEL LPAVLPPPAA TGGGGPAGSV 60 RPGSMTERAR LAKIPQPENA LKCPRCASTN TKFCYYNNYN LSQPRHFCKT CRRYWTRGGA 120 LRNVPVGGGC RRNNKRSSKR SRSTKSPNRS DQRSRNNVPT ISTSTITFPS HLPLPSTSTH 180 LSFLNTPFHN LNDFNSTLND MNFGEIQSHE GDGRFIDQFR LQQMQQFSFF PPLEQQPSNL 240 YPISEFGISH DLENVKVPGY QITLLIKANL FLQKSHLARS FLMKQLFLSL PAAAANRIHS 300 SSTCDAATRS GDRTIPSAPP FPSSYFQPPS SPPAYLSVHP SYYSVLSDEN TNRCLIQ

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MAFSSIPLYL DPSNWQHEQE NQQQQQLGVT NHEMNYPSEL LPAVLPPPAA TGGGGPAGSV  60
RPGSMTERAR LAKIPQPENA LKCPRCASTN TKFCYYNNYN LSQPRHFCKT CRRYWTRGGA  120
LRNVPVGGGC RRNNKRSSKR SRSTKSPNRS DQRSRNNVPT ISTSTITFPS HLPLPSTSTH  180
LSFLNTPFHN LNDFNSTLND MNFGEIQSHE GDGRFIDQFR LQQMQQFSFF PPLEQQPSNL  240
YPISEFGISH DLENVKVPGY QITLLIKANL FLQKSHLARS FLMKQLFLSL PAAAANRIHS  300
SSTCDAATRS GDRTIPSAPP FPSSYFQPPS SPPAYLSVHP SYYSVLSDEN TNRCLIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	3e-43	Dof family protein