PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49374.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 237aa    MW: 25508.7 Da    PI: 9.4367
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49374.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.61.3e-12653256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr ++ +g++ A I+        ++ +lg f ta+eAa a++aa+ k++g+
  PHT49374.1  6 RYRGVRKRS-WGKYQADIWI------GTTKYLGMFNTAKEAALAYDAAAIKFRGA 53
                69****888.**********......69************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MTEEVRYRGV RKRSWGKYQA DIWIGTTKYL GMFNTAKEAA LAYDAAAIKF RGAKAKTNFP  60
IPSLRNSAGG GTGDGGVAAV ASESESSSLQ SRGIEIDLNL PPPPEDMGRE EEERIGKRNE  120
RGTGGCRRLL EKGIMGRRSE VKQNVIDGSE KTAEEGMLGR KKEDAGGRGG YKVGIWIGYN  180
KYLGTFYIEK EDALAFDAAA IKLRDLKAKT NFPIPSLHSN ASGGNGDGGD VVVPGES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.14e-12ERF family protein