PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49376.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 228aa    MW: 25368.6 Da    PI: 7.7175
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49376.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.71.1e-162069255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +gr++AeIrdp     +   r++lg+f+ta e a a++aa+ +++g
  PHT49376.1 20 HYRGVRKRP-WGRYAAEIRDP-----HrkCRVWLGTFDTAVETAMAYDAAAIEFRG 69
                6********.**********6.....236***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MARPRRRPVV TATAAEKEVH YRGVRKRPWG RYAAEIRDPH RKCRVWLGTF DTAVETAMAY  60
DAAAIEFRGV KAKTNFPIPV DVTRSPSEVS TVESSTAMTK VKKVEVPEQL VIVESSYPPL  120
DLTLGRSSYY LGSKFFSSQT QNHLDARGNG GGLDRGEIFH TNGFRSIIMG SDEGDLSESD  180
SSSVVDFMGN NTQGHSDRPQ LSIGAEENVK LQKLMIGEFA WFIEMSFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-33ERF family protein