PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49377.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 340aa    MW: 37623.2 Da    PI: 6.6352
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.18.8e-132169254
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                +y+GVr ++ +gr++AeIrdp     +   +++lg+f+t  eA   ++a   +++
  PHT49377.1 21 HYRGVRKRP-WGRYAAEIRDP-----HrkCQVWLGTFDTTVEAGMTYDATTIEFR 69
                6********.**********6.....336**********99**999998766655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MARRHRRTTA ATATTVEKEV HYRGVRKRPW GRYAAEIRDP HRKCQVWLGT FDTTVEAGMT  60
YDATTIEFRG VKAKTNLPIP VDLTRSPSEV STIESSTAMT KVKKVEVPEE LVIVELSSLQ  120
LDLTLGRSSY CLGSKFFSSQ TQNYLDTRGG AGGLDRGEMF HTNGFGSVIM GSDTGDLNES  180
DSSSVVDFMV SFVSYQADLL KSSILAPELD VARYNPADTL ENTTVSQIRQ FSIGTISIAF  240
QIYQSQRISG SSSVLPEIQT ARNSVCSFPS RIETVNFESR FPQAKYSVET PPTDIHDDPP  300
QSPTYSALGA ELGVLSHDFH IDKKTLETKF YSSGNILKRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.11e-29ERF family protein