PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49542.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 211aa    MW: 24264 Da    PI: 6.3985
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.8e-1965115255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrd + ng   r++lg+f++aeeAa a+++a+  ++g
  PHT49542.1  65 SYRGVRRRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEEAALAYDQAAFLMRG 115
                 69*******.**********44465..**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MDFEFEFHNH NHNYNLNFNT SSLPFNINDS NEMFLYDLLQ AQADTDTSTN RAPMVEPKPS  60
SKAKSYRGVR RRPWGKFAAE IRDSTRNGIR VWLGTFDSAE EAALAYDQAA FLMRGTSAIL  120
NFSVERVVES LHEMKCHVEE GCSPVVALKK RHSLRKRKLN KKNCNVIKDE TNYVTNVVVF  180
EDLGVDYLEQ LLSSNNHSST SNDYQELWSN E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154159LRKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-53ERF family protein