PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49592.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 170aa    MW: 18971.6 Da    PI: 10.3164
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49592.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.35.7e-162170255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr +  +gr++AeIrdp     +   +++lg+f+t  eAa a++aa+ +++g
  PHT49592.1 21 HYHGVRKRL-WGRYAAEIRDP-----HrrCQVWLGTFDTVVEAAMAYDAAAIEFRG 70
                69****887.**********6.....226***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MARRHRRTVA VVATAAEKEV HYHGVRKRLW GRYAAEIRDP HRRCQVWLGT FDTVVEAAMA  60
YDAAAIEFRG VKAKINFPIP IDVTRKLRSS YCLGSKFFSS QTQNHLNSRG GGGGLDRGEM  120
FHTNRFGSII MGSDAGDLCK SNSSLVVDFI GNDTKDIQID LNFPSVPKNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.13e-21ERF family protein