PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49593.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 183aa    MW: 20046.4 Da    PI: 6.1518
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49593.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.59.4e-102157242
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeA 42
                +y+ Vr ++ +gr++AeIrdp     +   +++lg+f+ta eA
  PHT49593.1 21 HYRAVRNRP-WGRYAAEIRDP-----HrkCQVWLGTFDTAMEA 57
                689999666.**********6.....336**********8777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MAHRHRRTAA TTATTVEKEV HYRAVRNRPW GRYAAEIRDP HRKCQVWLGT FDTAMEAGMA  60
PSEVSTVESS TAMTKLKKVE VPEELVIVES SPLPLDLTLG RSSYCLGSKF FSSQTQNHLD  120
AHGGGGDLDR GEIFHTNGFG SVIMGSDAGD LSESDSSSVV DFMDNDTKGI QIDLNFPSVP  180
KKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.16e-19ERF family protein