PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT49594.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 212aa    MW: 23274.3 Da    PI: 9.8158
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT49594.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-172170255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +g+++AeIrdp     +   +++lg+f+ta eAa a++aa+ k++g
  PHT49594.1 21 HYRGVRKRS-WGKYAAEIRDP-----HrkCQVWLGTFDTAVEAAMAYDAAAIKFRG 70
                6*****888.**********6.....336************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MARRHRRTAA ATATAVEKEV HYRGVRKRSW GKYAAEIRDP HRKCQVWLGT FDTAVEAAMA  60
YDAAAIKFRG VKAKTNFPIP VDLTRSPSEV STVESSTAKT KVKKVEVPEE LVIVESSYPP  120
LDLTLGRSSY CLGSKLFSSQ TQNHLDAHGR GRGRGGLNSG EMFHTNRFGS VIMGSDAGDL  180
SETDSSSVVD FMGNDTKDIQ IDLNFPPVPK NK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.17e-24ERF family protein