PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT49665.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 822aa MW: 94506.7 Da PI: 7.4757

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT49665.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.3	3.1e-07	263	302	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT+eE e+ + k++G++ Wk a ++g + + ++k+ w+ PHT49665.1 263 KWTEEEYEIVRKFQKEHGNN-WKVLADELG--KHRFHVKDTWR 302 8***************99.******9..56777887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 822 aa Download sequence
MTNTDIESKS DDCDIKRKKE KKHGKHSEKF SEDCDEVALR IVEGKKSGKL KKSRVAEQEK 60 MHDTEDVQED IVAEVDEGDI SSPINIEEKN RTDNGNIKKM KKVKSGQKKV KSGHSSEDPT 120 HEIEEEKRTD NGNIKKKKKV KSGHSSEDPT HEKSAKKVRF SGHVQIFPSS DDPSDEKHEI 180 EDENLLRGKR FSKLEDEIVK EAVHKYVDLH NLGEEGLKKI LNSRSYPEIK GCWKEIGSAI 240 PYRPYTAVYY RAQILFRRSE SRKWTEEEYE IVRKFQKEHG NNWKVLADEL GKHRFHVKDT 300 WRRIRRPNQN KGQWTQEEYQ SLFDLVNTDL RLRLSEEKRS KYGMLRDNIA WTAISDKLST 360 RAEANCCLKW YDQLTSPMVA KGEWADVDDY RLVDALFELD ASCIEDVDWD NLLDHRPGEI 420 CRKRWNQMVL HIAVASSLNV SGGHINPAVT FGSLVGGRIS VVRAIYYWIA QLLGSVIASL 480 LLRLATDGFV ITKTILFLFF PMGLVLYCEK MLSHPLSDPP IMHYFWMDRH AYIDIFGESE 540 QHRYLVPADL TVGQFVYVVR KRINLTAEKA IFVFVKNILP PTGVANTDIE AKTDDCDLKR 600 KKEKKHGKHS EKFNEDSDEV ALRIVEGKKC RKLKKSRVAE QEKMHDTEDV QEDIVAEVDE 660 GDISSPINIE EKNRTDNGNI KKMKKVKSGQ KKVKSGHSSE DPTHEIEEEK RTDNGNIKKK 720 KKVKSGHSSE DPTHEKSAKK VRFSGHVQIF PSSDDPSDEK HEIEDENLLR GKRFSKLEDE 780 IVKEAVHKYV DLHNLGEEGL XLLSITLSEK ACSFAELRNS GI

Sequence ? help Back to Top

Protein Sequence Length: 822 aa Download sequence

MTNTDIESKS DDCDIKRKKE KKHGKHSEKF SEDCDEVALR IVEGKKSGKL KKSRVAEQEK  60
MHDTEDVQED IVAEVDEGDI SSPINIEEKN RTDNGNIKKM KKVKSGQKKV KSGHSSEDPT  120
HEIEEEKRTD NGNIKKKKKV KSGHSSEDPT HEKSAKKVRF SGHVQIFPSS DDPSDEKHEI  180
EDENLLRGKR FSKLEDEIVK EAVHKYVDLH NLGEEGLKKI LNSRSYPEIK GCWKEIGSAI  240
PYRPYTAVYY RAQILFRRSE SRKWTEEEYE IVRKFQKEHG NNWKVLADEL GKHRFHVKDT  300
WRRIRRPNQN KGQWTQEEYQ SLFDLVNTDL RLRLSEEKRS KYGMLRDNIA WTAISDKLST  360
RAEANCCLKW YDQLTSPMVA KGEWADVDDY RLVDALFELD ASCIEDVDWD NLLDHRPGEI  420
CRKRWNQMVL HIAVASSLNV SGGHINPAVT FGSLVGGRIS VVRAIYYWIA QLLGSVIASL  480
LLRLATDGFV ITKTILFLFF PMGLVLYCEK MLSHPLSDPP IMHYFWMDRH AYIDIFGESE  540
QHRYLVPADL TVGQFVYVVR KRINLTAEKA IFVFVKNILP PTGVANTDIE AKTDDCDLKR  600
KKEKKHGKHS EKFNEDSDEV ALRIVEGKKC RKLKKSRVAE QEKMHDTEDV QEDIVAEVDE  660
GDISSPINIE EKNRTDNGNI KKMKKVKSGQ KKVKSGHSSE DPTHEIEEEK RTDNGNIKKK  720
KKVKSGHSSE DPTHEKSAKK VRFSGHVQIF PSSDDPSDEK HEIEDENLLR GKRFSKLEDE  780
IVKEAVHKYV DLHNLGEEGL XLLSITLSEK ACSFAELRNS GI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	16	49	KRKKEKKHGKHSEKFSEDCDEVALRIVEGKKSGK
2	98	131	KRKKEKKHGKHSEKFSEDCDEVALRIVEGKKSGK
3	599	632	KRKKEKKHGKHSEKFSEDCDEVALRIVEGKKSGK
4	681	714	KRKKEKKHGKHSEKFSEDCDEVALRIVEGKKSGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-117	MYB_related family protein