PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50058.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 172aa    MW: 19162.4 Da    PI: 5.0439
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.8e-192070256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 y+GVr +k +g+Wv+eIr+p   gk++r++lg+f tae+Aa+a++ a++ ++g+
  PHT50058.1 20 AYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETAEMAAAAYDSAALHFRGH 70
                69****999.**********8...557***********************99996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MEEYNNNTSK GNRGGGITSA YRGVRKRKWG KWVSEIREPG KKTRIWLGSF ETAEMAAAAY  60
DSAALHFRGH AAKLNFPELV DHLPKPASSC PEEIRLAAQQ AALRVETTNS SNHLMASTSQ  120
VDVAPITVGL SPSQIQAIND FPMDSPTMWS TEEPIFTYEM SDHEEMDDCL WD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.17e-49ERF family protein