PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50079.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 198aa    MW: 22217.3 Da    PI: 9.7962
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.35.5e-115297247
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++WT+ E+  ++++ + +G+g+W  Ia+ +   Rt  q+ s+ qk+
       PHT50079.1 52 NPWTENEQIAFLKGLEFHGKGNWVQIAKDFLPSRTSAQVASHAQKH 97
                     69***************************999************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MGRRNCTLCG GNGHNQRTCI EKGKSIKLFG VEITTSTVAA MSKIGRKIKK GNPWTENEQI  60
AFLKGLEFHG KGNWVQIAKD FLPSRTSAQV ASHAQKHFMR LDANSNERKY LKKSSVFDLH  120
LEKTEDREHA IVPVETHHVP SFLSNYNMMK VPTVPEVMPV TWVYPYHQYA STSASATTFD  180
NFVSGISSSS KDNLELTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.17e-26MYB_related family protein