PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50080.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 158aa    MW: 18508.5 Da    PI: 10.3355
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50080.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.31.3e-113782247
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++WT++E+  ++++ k++G+g+W++Ia+ +  + t  q+ ++ qk+
       PHT50080.1 37 NPWTEDEQIAFLKGLKLHGKGNWAKIAKDFFPNITSTQIANHSQKH 82
                     58**************************9888**********9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MCSEKGKNIK LFGLKITTTI TTVMFRKDCR RKIKKANPWT EDEQIAFLKG LKLHGKGNWA  60
KIAKDFFPNI TSTQIANHSQ KHFMRLDANS NERKHHKKSS VFDIHLEKIE DIEHAIVPLE  120
NNQESLHVPI FLPNFNLTER IQAPKVKPVT WVYMYPYH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.11e-17MYB_related family protein