PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50285.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 290aa    MW: 33316.9 Da    PI: 8.104
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.11.2e-5181321128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lp+GfrFhPtdeelv++yL++k++++++ +  +i+e+d+yk++PwdLp  +  +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ +   + 
  PHT50285.1   8 LPAGFRFHPTDEELVTHYLCRKCASQPIAV-PIIAEIDLYKYNPWDLPDLALYGEKEWYFFSPRDRKYPNGSRPNRAAGNGYWKATGADKAIGR--PKP 103
                 799*************************99.88***************65556799************************************98..789 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +g+kk Lvfy g+apkgekt+W+mheyrl
  PHT50285.1 104 MGIKKALVFYAGKAPKGEKTNWIMHEYRL 132
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MGAVELRLPA GFRFHPTDEE LVTHYLCRKC ASQPIAVPII AEIDLYKYNP WDLPDLALYG  60
EKEWYFFSPR DRKYPNGSRP NRAAGNGYWK ATGADKAIGR PKPMGIKKAL VFYAGKAPKG  120
EKTNWIMHEY RLAHVDRSAR NKNNSLRLDD WVLCRIYNKK STIEKSQLNS RKMNVAMSPV  180
DIKPKIMAFP VSTRPSVTSQ QVNNDFIYFD SSDSLPKLHT DSSCSEHVLS PEFTCEREVQ  240
SEPKVSEWEK NALDFPFNYS DDATTTMGEL ESCYEMSPLQ DIFMYLQKPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-136NAC family protein