PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50451.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 410aa    MW: 46442.1 Da    PI: 4.7318
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50451.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.20.000172142313855
                 STCHHHHHHHHHHHHHHH CS
         HLH  38 lsKaeiLekAveYIksLq 55 
                 l+K++iL  A++YI++Lq
  PHT50451.1 214 LDKVAILGDAIDYINELQ 231
                 89***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MLSGDNFSEW KEKVLLTLGY SDLDLAVRVG EPSKPTKSST PKAKAIDEQF VSFDKSLAST  60
LMKRLSSMTF DRSHTVREHI MEMRVIDTEL KSLEVDMSAS FLVHFILNLL STEYARRRNI  120
RSDCISREQL REFWEQIVNQ SFDSRLQTLF DMVDKNADGR LTEEEVRENL SLLLKIISLS  180
ASANKLSNIQ KQAEEYAALI MEELDPDNMG YIMLDKVAIL GDAIDYINEL QEQVKLYVTE  240
FNEIEAEVTN SEAAEMVLSD MTEMSKLEVN QIDARKFLLK VFRSRKTGRF TQLIEAMSYL  300
GLEIVNVSFT TSGGEILSIF IAEQAWIQLT HSLSCLGSTA CSSFQIAALF HLMRSMTFKA  360
PAVLGIQIVS QATKSFFEHS LLPVHRKVLH TVVTGDHDIE DSGNEVDLMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.13e-15bHLH family protein