PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50801.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 152aa    MW: 17305.4 Da    PI: 6.5043
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50801.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer106.71.4e-334398359
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                  vrY+eClkNhA+ +Ggha+DGCgEfmp+ geegt++alkCaAC+CHRnFHR+e e 
   PHT50801.1 43 IVRYRECLKNHAVGIGGHALDGCGEFMPA-GEEGTMDALKCAACNCHRNFHRKEAEG 98
                 68**************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MEFDEEQEEQ QQEQEIGAAS EHYRTPGDNS VEGVSTTIVR KSIVRYRECL KNHAVGIGGH  60
ALDGCGEFMP AGEEGTMDAL KCAACNCHRN FHRKEAEGDQ KDKMLAFAER LGWRMQKQDE  120
ALVQQFCAET NVKRHVFKVW MHNNKHTLGK KP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.11e-30ZF-HD family protein