PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50847.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 262aa    MW: 28980.3 Da    PI: 7.359
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.66.3e-17182219136
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                 C++Cgt++  Tp++Rrgpdg +tLCnaCGl ++ kg++
  PHT50847.1 182 CTHCGTSSnnTPMMRRGPDGRRTLCNACGLTWANKGVM 219
                 *******99**************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MNVDSNFSGA SEEVPGGGDE VIGNFPAGVD GGVGGVKVTM PNYTVYSASD VTLHNGEANF  60
DQLTLSFRGR IYVFDGVPTQ KVQLVFQLLG GYEYSPGTQA LGLSSASQKD YVDNPVHCAD  120
PKRLESLLRF YEKRKKRCYE KKIRYGIRQE VAYRMERKNG LFARKGSTKP KEENIPPEET  180
WCTHCGTSSN NTPMMRRGPD GRRTLCNACG LTWANKGVMR TLYRASYDNT ELTELEDENH  240
SNSDYGAPPC SVSHQVSSSA CQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.27e-42GATA family protein