PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50950.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 201aa    MW: 22369.8 Da    PI: 10.6904
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.65.9e-104389354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                ++h  +Er+RR+riN  +++L++l P +     +K +K  +L++Av  +k+L
  PHT50950.1 43 VTHAVAERKRRERINGHLHTLKKLFPYL-----PKKDKPRVLTEAVTQLKEL 89
                68*************************8.....6999999***999988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MLSSLQGCNG FLQHQVLVDH QRKNGDGKSS SNTKKNKSKD SAVTHAVAER KRRERINGHL  60
HTLKKLFPYL PKKDKPRVLT EAVTQLKELR KNIAQQLELS SLFIPSENDV VIVNYCDNEE  120
RTVKTTVCCE DRPALNRDIS SAIRSVQGRV VKAEMATVGG RTKAEMVVVL AKANGGEKDV  180
AQLKRALKAV VENRALGRRF G
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14954ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.15e-29bHLH family protein