PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT51118.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 255aa    MW: 28589.4 Da    PI: 9.4506
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT51118.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.44.6e-17771541699
                 EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                   +pkkfa++    ++ +  ++l+ +sg +W+v+l  +  +++ +l++GWkeFv a+ L+  D ++Fk++g+s+f   v+vf++
  PHT51118.1  77 YAIPKKFANNLR--EKLGDSVSLTGPSGATWNVRL--TLIGDALFLKDGWKEFVGAHSLEYDDLLIFKYNGSSRF--DVSVFDR 154
                 68******5444..457779***************..889999**************************998999..9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MARAYNKKVR PRNFEVGQLV LRRLLPHQVE AKGKFSPNWQ GPFVVKKVLP NGALYLTDIN  60
GKMAEMAINV DAVKRYYAIP KKFANNLREK LGDSVSLTGP SGATWNVRLT LIGDALFLKD  120
GWKEFVGAHS LEYDDLLIFK YNGSSRFDVS VFDRQSLCEK EASCFVKKCE HADVASRSRK  180
KRHTPREYSS CEVSEAPPTK KPKLVETPTS EDTSKSSSHD EYEPPAKKKT LASTSTSAET  240
NESSSHNECE PPTEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.13e-23B3 family protein