PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT51240.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 431aa MW: 48579.7 Da PI: 6.7253

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT51240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	358	395	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ L++++gL+++qV++WF N R + PHT51240.1 358 FEHflHPYPNDSEKLMLSSQTGLSKNQVSNWFINARVR 395 554459******************************88 PP
2	BELL	98.3	6.3e-32	221	292	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er+el k+ kL+ lleeV++rY+qy++ ++ v s Fe++ag gs kpYt+lAl+a+SrhF +L+dai++qi PHT51240.1 221 ERHELYVKIMKLVALLEEVERRYEQYYQHMEEVTSTFEVIAGFGSGKPYTALALQAMSRHFCSLRDAIISQI 292 799********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MVSKDSPPPS HSSILHQFIN SDSITSQIGS QHFDIYQSDL SGNTTSSTNT AYQPHHGVLS 60 RSIEFVNPPH FTTDSDVSNS RHLMDLLGAS HDANQQAQRL SLSLGSHSLV SSLSSSFANP 120 SYMNQEIDQR NNEFSFSAAA MNQSFPTVCG TESFVSAIGT SKYLKPTQSL LEELVCIGGK 180 SIDLSNEKFI RRLSRNSKKG SLSLRVMLKG EIPPSNELFN ERHELYVKIM KLVALLEEVE 240 RRYEQYYQHM EEVTSTFEVI AGFGSGKPYT ALALQAMSRH FCSLRDAIIS QINVIRLKIP 300 RDVPKISSGL SHLSLFEKET LQNRMSLQQL GIIQSNRAWR PIRGLPETSV AILRSWLFEH 360 FLHPYPNDSE KLMLSSQTGL SKNQVSNWFI NARVRLWKPM IEEMYKEEFA ESSVESDHLL 420 NREGVTDSAE E

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MVSKDSPPPS HSSILHQFIN SDSITSQIGS QHFDIYQSDL SGNTTSSTNT AYQPHHGVLS  60
RSIEFVNPPH FTTDSDVSNS RHLMDLLGAS HDANQQAQRL SLSLGSHSLV SSLSSSFANP  120
SYMNQEIDQR NNEFSFSAAA MNQSFPTVCG TESFVSAIGT SKYLKPTQSL LEELVCIGGK  180
SIDLSNEKFI RRLSRNSKKG SLSLRVMLKG EIPPSNELFN ERHELYVKIM KLVALLEEVE  240
RRYEQYYQHM EEVTSTFEVI AGFGSGKPYT ALALQAMSRH FCSLRDAIIS QINVIRLKIP  300
RDVPKISSGL SHLSLFEKET LQNRMSLQQL GIIQSNRAWR PIRGLPETSV AILRSWLFEH  360
FLHPYPNDSE KLMLSSQTGL SKNQVSNWFI NARVRLWKPM IEEMYKEEFA ESSVESDHLL  420
NREGVTDSAE E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	2e-92	TALE family protein