PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT51680.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 570aa    MW: 63896.2 Da    PI: 5.9552
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT51680.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS416.91.8e-1272005691373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+a+++++l   + l+a+++  +s +gdp+qRl ay++e+L ar   s++++y++l+++e +    ++ ++++ +++e++P+lkf++++aN
  PHT51680.1 200 LKQLLITCARALAENKLDDFEILVAKVRSFVSVTGDPIQRLGAYIVEGLVARKELSGTTIYRSLRCKEPA---GKDLFSYMYILYEICPYLKFGYMAAN 295
                 689***************************************************9**************9...99999999****************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  aI+ea  +e+++HiiDf+i qG+QW+++lqaLa+Rp+g+p +RiTg+++p s+  + + l ++++rL+ + e++++ +ef++ v     +++ ++L+v
  PHT51680.1 296 GAIVEACRNEDHIHIIDFQIAQGTQWMTILQALAARPGGAPYVRITGIDDPLSQyaRGDGLAAVAKRLSAISEKFNIAVEFHA-VPVFALEVTRDMLDV 393
                 **************************************************9998999**************************.566677889****** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +pgEalaVn++lqlh+++desv+++++rd++++++ksl Pk+v++veqe+++n+++Fl rf+eal+yy a+f+s++a+lpr+s+eri+vE+++l+r+iv
  PHT51680.1 394 RPGEALAVNFHLQLHHTPDESVDVNNPRDDLIRMIKSLCPKIVTLVEQESNTNTAPFLPRFVEALDYYHAMFESIDATLPRDSKERINVEQHCLARDIV 492
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 nv+aceg+er+erhe l+kW++r+++aGF+++pls+++ + +k l+++++ + y + e++g+++lgWk+r+Lvs+SaW
  PHT51680.1 493 NVIACEGKERVERHELLGKWKSRFMMAGFQQYPLSSYVSSVIKDLMKRYS-EHYALVEKDGAMLLGWKERNLVSASAW 569
                 **************************************************.55************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    
MDSGDYYGYG VTDRDLSYSS YPTVSSLETR PFGTSKFDSG NSPLANYFES HTFNTVTDYQ  60
EQHSFIENLS GASSSSDSSL DYNQYFHRPS PSEDCLPEGL QVFSSGTSAL HNVDHSRNTK  120
HTHLQLESAL VGDAMKSNPY LGKNRGAQTS SLRSRAWNKE GQVLDRTQQS LVSILNGIQS  180
DTQDKVMEDL ILLNVPSSNL KQLLITCARA LAENKLDDFE ILVAKVRSFV SVTGDPIQRL  240
GAYIVEGLVA RKELSGTTIY RSLRCKEPAG KDLFSYMYIL YEICPYLKFG YMAANGAIVE  300
ACRNEDHIHI IDFQIAQGTQ WMTILQALAA RPGGAPYVRI TGIDDPLSQY ARGDGLAAVA  360
KRLSAISEKF NIAVEFHAVP VFALEVTRDM LDVRPGEALA VNFHLQLHHT PDESVDVNNP  420
RDDLIRMIKS LCPKIVTLVE QESNTNTAPF LPRFVEALDY YHAMFESIDA TLPRDSKERI  480
NVEQHCLARD IVNVIACEGK ERVERHELLG KWKSRFMMAG FQQYPLSSYV SSVIKDLMKR  540
YSEHYALVEK DGAMLLGWKE RNLVSASAWF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-172GRAS family protein