PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT51718.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 328aa    MW: 36309.1 Da    PI: 8.7898
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT51718.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix452.8e-1457147186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  +++L+ea  +   +l+rg+l++++W+ev++++     + ++  r+ +qCk++++ l+k+yk +k++ ++ + + + ++p+f+ l+
  PHT51718.1  57 CWSEAATHTLMEAWGSHYLELKRGNLRQKHWQEVANAVnalhgHTKKQYRTDVQCKNRIDTLKKKYKIEKARVSQSHGRYVPQWPFFNGLD 147
                 7*************************************999987778889**********************9999999999*****9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MSDDDLVASP SLNNNSPSPS LSQSPTRNEL VPLPPLPAIP TPAASTRLAA FPSREDCWSE  60
AATHTLMEAW GSHYLELKRG NLRQKHWQEV ANAVNALHGH TKKQYRTDVQ CKNRIDTLKK  120
KYKIEKARVS QSHGRYVPQW PFFNGLDVLI GDNFKPSPSP VMVTASPAMV TNRRKTPPLL  180
PPPPSAVPVG PRSKRPAAVM EDAVSRRNFS TMAAAAAAAA SEDTEEEVEE EESETSSPAT  240
ITGTGGLSRR KENGALAEGC SRLAEAIGRF AEIYERVEDA KQRQMVELEK QRMQFAKDLE  300
IQRMKLIMES QVQLEKLKRA KNSTQDGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-62Trihelix family protein