PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT51766.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 113aa    MW: 13297.5 Da    PI: 8.4145
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT51766.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.40.000155475930
                HHHHHHHHHHHHHHHHCTSCCC CS
         HLH  9 ErrRRdriNsafeeLrellPka 30
                 rrRR+r  s +++L ++lP+ 
  PHT51766.1 54 SRRRRSRPSSEIQKLAKILPTY 75
                59******************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MLNQIIKGFS IPAGLPWYLV YEVYILINCG DEFHWVLAVV VLKERSIRVY DSMSRRRRSR  60
PSSEIQKLAK ILPTYLDMSG FLDQKVRTDW SMIEAYWDKM ANPFDVQYVE GIS