PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT51779.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 143aa    MW: 16487.8 Da    PI: 5.9271
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT51779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.60.000253231030
                HHHHHHHHHHHHHHHCTSCCC CS
         HLH 10 rrRRdriNsafeeLrellPka 30
                rrRR+r+   +++L ++lP+ 
  PHT51779.1  3 RRRRSRLSCEIQKLAKILPTY 23
                9******************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MLRRRRSRLS CEIQKLAKIL PTYLDMSGFL DQKVRTDWST IEAYWDKMAN PFDVQYLDGI  60
SQQTIGSLNC GLFIATYAEY LSDGLQVPND GLDVGLLRKR YATLLWKYGE ERAQKPYATN  120
VKDPRQPNPN SIALDEEQLV HID