PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT51784.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 490aa MW: 57296 Da PI: 8.7727

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT51784.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23	2.6e-07	37	80	48	91
FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++ ++++ +r++Cka+++ + ++dg vtk+ le nHel p PHT51784.1 37 GDSYTKENQRKRVDCKARVNYQVMNDGSCIVTKFILEYNHELEP 80 456678999********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MNKSHQSVQD EDLSVSSGEE DHYGEDDVEE EEGPMHGDSY TKENQRKRVD CKARVNYQVM 60 NDGSCIVTKF ILEYNHELEP ALLRFLPSHR ELSRPVKKSL VAHGIAGLRP SKSIRLLEVE 120 AGGLKIIRFK YEKELESQAS KRKHLVRLTI AFDWDMQIYG HYTCAIYNFF RVHVVRLPHC 180 EIKSHVNFDA VEGFKVYNVT DYSIQSDYHG DNFFFTVEYY PSNQYIECNC KTFKSEGIVC 240 CHIIRTMTFK RIHLFHDIYI LRRWRRDIVR PHLSKFFPRG YLTMMDEYRV YNGIRKWFNR 300 KYNLVLDCPV RRRDLKNILK FCFKTYMVWV DDMAVPNVLN SNSNIDSIII RNPREFHSCG 360 RPQINKNRSS RQYVFRGDAR RWGSGYYDVY EEGQSSQGRS GDGRRGCRGS RGGGVCGSRR 420 ARGDDENISN HPTVHEFLCF SRTLGDVISY RVFLVELVGV LSIIVEDVDR SVRNGQEFLD 480 KLRNPVSQTA

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MNKSHQSVQD EDLSVSSGEE DHYGEDDVEE EEGPMHGDSY TKENQRKRVD CKARVNYQVM  60
NDGSCIVTKF ILEYNHELEP ALLRFLPSHR ELSRPVKKSL VAHGIAGLRP SKSIRLLEVE  120
AGGLKIIRFK YEKELESQAS KRKHLVRLTI AFDWDMQIYG HYTCAIYNFF RVHVVRLPHC  180
EIKSHVNFDA VEGFKVYNVT DYSIQSDYHG DNFFFTVEYY PSNQYIECNC KTFKSEGIVC  240
CHIIRTMTFK RIHLFHDIYI LRRWRRDIVR PHLSKFFPRG YLTMMDEYRV YNGIRKWFNR  300
KYNLVLDCPV RRRDLKNILK FCFKTYMVWV DDMAVPNVLN SNSNIDSIII RNPREFHSCG  360
RPQINKNRSS RQYVFRGDAR RWGSGYYDVY EEGQSSQGRS GDGRRGCRGS RGGGVCGSRR  420
ARGDDENISN HPTVHEFLCF SRTLGDVISY RVFLVELVGV LSIIVEDVDR SVRNGQEFLD  480
KLRNPVSQTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-08	FAR1 family protein