PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT52156.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 253aa    MW: 28875.6 Da    PI: 9.7893
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT52156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.52.4e-13150195454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  h + ErrRR+++N+ f+ Lr+llP       +K +Ka++L  +++YI+ L
  PHT52156.1 150 HHMISERRRREKLNENFQHLRSLLPLG-----TKKDKASVLASTTDYISCL 195
                 68899********************97.....7***************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MNNLFPNDFS NQTPTTTTTT TTRKAIILPI DQNLHSSSSS SSEYSPLYLN EIQKLTQFPK  60
IEGEDDALRQ AYLAVLSSSS SPSPSLSRGQ ITDKLTRMSS AFTKFRPDNY VSTSCKHHNN  120
NILKRYMTFF NNLYTINRQE GVRATTTQVH HMISERRRRE KLNENFQHLR SLLPLGTKKD  180
KASVLASTTD YISCLKDQVK ELCKRNEILE AQLLNKKEAF QFQQNESGKV AVYITNVEER  240
IVDLQVIARG KCS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155160ERRRRE
2156161RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.15e-23bHLH family protein