PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT52319.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 93aa    MW: 10615.6 Da    PI: 10.2733
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT52319.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.1e-20555155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                ++++GVr+++ +g+Wv+eIr+p        +r++lg+f+taeeAa+a+++a+  + g
  PHT52319.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFDTAEEAARAYDEAAILMSG 55
                59*******9.**********8.....334*********************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MVHTKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFDTAE EAARAYDEAA ILMSGRNAKT  60
NFPIAQDSDN NNNNNNSNNN KDLKANDQDS SSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.15e-32ERF family protein