PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT52402.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 677aa MW: 74587.1 Da PI: 6.2103

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT52402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	61	2.4e-19	208	251	1	45
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 kpr++W+ +LH++Fv av+qL G ekA+Pk+il+lm+v+gLt+e+ PHT52402.1 208 KPRVVWSIDLHKKFVTAVNQL-GLEKAVPKRILDLMNVEGLTREN 251 79*****************.******************986 PP
2	Myb_DNA-binding	21.5	5.3e-07	210	250	1	38
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlk 38 r W+ ++++++v av+qlG + +k+I m+ +g+t++ PHT52402.1 210 RVVWSIDLHKKFVTAVNQLGLEkaVPKRILDLMNvEGLTRE 250 678********************************999985 PP
3	Response_reg	81.3	3.1e-27	26	134	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+p+ ++ll +l+k +y +v+++++++ al++lke++ +Dl++ D+ mp+mdG++ll+ r e +lp+i+++a+++++++ + + Ga PHT52402.1 26 VLAVDDDPICLKLLDGLLRKCQY-QVTTTSQARTALKMLKENKdrFDLVISDVHMPDMDGFKLLELVRLEM-DLPVIMLSANSDSKLVMKGITHGAC 120 799******************.***********998889***************9988865.********************* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +l+Kp+ eel + PHT52402.1 121 NYLVKPVRLEELKN 134 *********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MTVEEIRGNM SGERENYDNF SVGMKVLAVD DDPICLKLLD GLLRKCQYQV TTTSQARTAL 60 KMLKENKDRF DLVISDVHMP DMDGFKLLEL VRLEMDLPVI MLSANSDSKL VMKGITHGAC 120 NYLVKPVRLE ELKNIWQHVI RRKEVEPKNW NKSNDQDKAN QGGVEGERGS QISGNADQSG 180 KVKKKRKYEE YESDENGNDD EDSATLKKPR VVWSIDLHKK FVTAVNQLGL EKAVPKRILD 240 LMNVEGLTRE NKFRLFLKKV NSAEAQQANM VAAALGGKDS AYIRMGSLDG LGDFRTLAGS 300 GRFGQGQASL SSYASGGMLG RLNSPAGVTL RNLASSPMLQ PNHGQNLSNN ALMKFNPNVP 360 SASQNANLFQ GIPASLEFDQ LQQSKCATRM GELNPLVGSS NSAMSNVNNP TLLQVNSEQS 420 LTGAGIGNQT SLNITSLSSE AFNTGVVTGS SNFLDHDRYN ENWQNTIQPL KFQSSSFPLT 480 EHFSNSHLPQ RDNDTSTDPH LQNNPVDFST STIVSLPFEA SRGETQCRES SGAAVQIMNQ 540 STCQQWPDQN QHYSHNLNNI FGNLSSQVSS NGEMASLTHP MDQNNDIFCR RVETSLTGRS 600 NGGSSTHMHH SEGEKLTHHS RTNEDHLFQP TKQQYSFLPQ GYGSFDDLMS AMKQEHDGAM 660 LEGGEFGCDG FSLGSGL

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MTVEEIRGNM SGERENYDNF SVGMKVLAVD DDPICLKLLD GLLRKCQYQV TTTSQARTAL  60
KMLKENKDRF DLVISDVHMP DMDGFKLLEL VRLEMDLPVI MLSANSDSKL VMKGITHGAC  120
NYLVKPVRLE ELKNIWQHVI RRKEVEPKNW NKSNDQDKAN QGGVEGERGS QISGNADQSG  180
KVKKKRKYEE YESDENGNDD EDSATLKKPR VVWSIDLHKK FVTAVNQLGL EKAVPKRILD  240
LMNVEGLTRE NKFRLFLKKV NSAEAQQANM VAAALGGKDS AYIRMGSLDG LGDFRTLAGS  300
GRFGQGQASL SSYASGGMLG RLNSPAGVTL RNLASSPMLQ PNHGQNLSNN ALMKFNPNVP  360
SASQNANLFQ GIPASLEFDQ LQQSKCATRM GELNPLVGSS NSAMSNVNNP TLLQVNSEQS  420
LTGAGIGNQT SLNITSLSSE AFNTGVVTGS SNFLDHDRYN ENWQNTIQPL KFQSSSFPLT  480
EHFSNSHLPQ RDNDTSTDPH LQNNPVDFST STIVSLPFEA SRGETQCRES SGAAVQIMNQ  540
STCQQWPDQN QHYSHNLNNI FGNLSSQVSS NGEMASLTHP MDQNNDIFCR RVETSLTGRS  600
NGGSSTHMHH SEGEKLTHHS RTNEDHLFQP TKQQYSFLPQ GYGSFDDLMS AMKQEHDGAM  660
LEGGEFGCDG FSLGSGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-111	ARR-B family protein