PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT52422.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 195aa MW: 23080.2 Da PI: 5.393

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT52422.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	93.2	3e-29	51	140	5	103
HHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 5 klyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkk 101 ++ye+l d ++k+lisw++ng+sf+++d+++fa +vLp++F+h+n++SF+ QLn YgFkkv+ ++ eF+h++F++gk + l+kikrk+ PHT52422.1 51 EIYEMLADIQFKSLISWTNNGTSFIIHDNHRFAVEVLPRFFRHNNLSSFICQLNCYGFKKVNWDK---------FEFRHEWFQRGKGQWLKKIKRKH 138 68**********************************************************999.........67******************9 PP XX CS HSF_DNA-bind 102 se 103 s+ PHT52422.1 139 SK 140 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
METDRGKGKM TEIDNIVKML GEGYEGLEDV HIDISMLEYD DGRQCDNVNN EIYEMLADIQ 60 FKSLISWTNN GTSFIIHDNH RFAVEVLPRF FRHNNLSSFI CQLNCYGFKK VNWDKFEFRH 120 EWFQRGKGQW LKKIKRKHSK SQMNERLMER QGIDETAAFT IGKEIEEITA EQAAMREEII 180 VLQRQLDMLE RDGGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	5e-29	HSF family protein