PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT52521.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 300aa    MW: 34555.6 Da    PI: 6.3513
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT52521.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.26e-22130192159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEE.EEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvv.eitYegeHnhe 59 
                 ++Dg++WrKYGqK++ +s++pr YYrCt++   +C+++k+v   +e+pk++ ++tY g+H+++
  PHT52521.1 130 MNDGCAWRKYGQKSILNSKYPRCYYRCTHKydqDCRATKQVHIMQENPKIMyHTTYFGNHTCN 192
                 58***************************99999**************975389*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEELVDETPR KRLIKELVEG KSFAKQLQSL LQQPNIEHYD GSVLADELVL KIWRSFTQAI  60
TELNTLVNSN SILVQTQMEV EKTEEVDQAD TGDRSNSELK KKGKQGGKDR RGCYKRRNNS  120
GSWMRESETM NDGCAWRKYG QKSILNSKYP RCYYRCTHKY DQDCRATKQV HIMQENPKIM  180
YHTTYFGNHT CNPAKIRKHI NNAQFNHSML ECPPFEVKPK IPSSVTHDST EEEEESLKGQ  240
SDNVSSTMDS YLWEDFMPSS PSVHDSTLAS HNSSSYFQGL ISSDMGDLVK FSDFEAIEFF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199105LKKKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-39WRKY family protein