PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT52534.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 203aa    MW: 22442.8 Da    PI: 10.378
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT52534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.61.3e-141662354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r+h+e+E+rRRdriN  +++Lr+l+P++     +K++Ka+ L  +++++k+L
  PHT52534.1 16 RSHSEAEKRRRDRINAQLSTLRKLIPTS-----EKMDKAALLGSVIDHVKDL 62
                78*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MDEIGFGGKV TASASRSHSE AEKRRRDRIN AQLSTLRKLI PTSEKMDKAA LLGSVIDHVK  60
DLKGRSTEIS KVLNTPTDID EVTIEHLNEE ENIGSASASK RKDSVILRAS FSCSDRPELF  120
SELKRAIKNL KLTVMEADIT SLGGRIKGIF VLCPGENSAK DVCMNSLKHS LRVVLCRIAI  180
TPSTSNSRIK SKRQRFFLPA QFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190195KSKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.14e-43bHLH family protein