PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT52876.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 141aa    MW: 16004.5 Da    PI: 5.9404
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT52876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.49.6e-201969255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +g+++AeIrd ++ng   r++lg++ taeeAa+a+++a+ +++g
  PHT52876.1 19 RYRGVRKRP-WGKYAAEIRDINKNG--VRVWLGTYATAEEAARAYDKAAFEMRG 69
                59*******.**********76676..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MDEDNSNIKN KESGGEEIRY RGVRKRPWGK YAAEIRDINK NGVRVWLGTY ATAEEAARAY  60
DKAAFEMRGR FAVLNFPHEH PSFSSDHSSS TSSSYSIASS STSHSSVHNA HEVKEVIEFE  120
YFDDKLLEDL LGFESDKTKF T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.13e-24ERF family protein